GSVIVT01009946001

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000448 (LandPlants) Phylogenetic Tree(s): OG_05_0000448_tree ,
OG_06_0013683 (SeedPlants) Phylogenetic Tree(s): OG_06_0013683_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009946001
Cluster	HCCA: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00193700	evm_27.TU.AmTr_v1...	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00018p00193820	evm_27.TU.AmTr_v1...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00076p00195870	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.02	Archaeplastida
AT4G18050	PGP9	P-glycoprotein 9	0.03	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.03	Archaeplastida
Cre17.g725200	No alias	ABC transporter B family member 12 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_08616	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_13906	No alias	subfamily ABCB transporter	0.09	Archaeplastida
Gb_13908	No alias	ABC transporter B family member 10 OS=Arabidopsis...	0.04	Archaeplastida
Gb_23626	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_27347	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_36862	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.02	Archaeplastida
LOC_Os05g04610.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_111099g0010	No alias	subfamily ABCB transporter	0.06	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp2g02920.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	Archaeplastida
Mp2g06270.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp7g16060.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Pp3c17_16450V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.03	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Solyc02g087410.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc06g009290.4.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc08g076720.4.1	No alias	subfamily ABCB transporter	0.09	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e006786_P002	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Zm00001e025063_P001	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Zm00001e041008_P003	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Neighborhood
MF	GO:0015928	fucosidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	898	927
IPR003439	ABC_transporter-like	407	555
IPR011527	ABC1_TM_dom	659	856
IPR011527	ABC1_TM_dom	50	338

External Links

No external refs found!

GSVIVT01009946001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation