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  5. GSVIVT01009973001

GSVIVT01009973001


Description : UPF0496 protein At1g20180 OS=Arabidopsis thaliana


Gene families : OG0002512 (Archaeplastida) Phylogenetic Tree(s): OG0002512_tree ,
OG_05_0001655 (LandPlants) Phylogenetic Tree(s): OG_05_0001655_tree ,
OG_06_0000925 (SeedPlants) Phylogenetic Tree(s): OG_06_0000925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009973001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00096260 evm_27.TU.AmTr_v1... UPF0496 protein At3g19330 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00040p00067520 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G20180 No alias Protein of unknown function (DUF677) 0.04 Archaeplastida
Gb_12697 No alias UPF0496 protein At3g19330 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g05440.1 No alias UPF0496 protein 3 OS=Oryza sativa subsp. japonica... 0.08 Archaeplastida
MA_115167g0010 No alias UPF0496 protein At3g19330 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g081840.4.1 No alias UPF0496 protein At1g20180 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g056570.1.1 No alias UPF0496 protein At3g49070 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007749 DUF677 91 364
No external refs found!