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Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana
Gene families : OG0001132 (Archaeplastida) Phylogenetic Tree(s): OG0001132_tree ,
OG_05_0001403 (LandPlants) Phylogenetic Tree(s): OG_05_0001403_tree ,
OG_06_0001294 (SeedPlants) Phylogenetic Tree(s): OG_06_0001294_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01010013001 | |
| Cluster | HCCA: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_04218 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Gb_04695 | No alias | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.06 | Archaeplastida | |
| Gb_27183 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | Archaeplastida | |
| LOC_Os06g03600.1 | No alias | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| LOC_Os11g10060.1 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.04 | Archaeplastida | |
| MA_13825g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_208023g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp8g17020.1 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Pp3c16_1979V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Pp3c16_1990V3.1 | No alias | SEUSS transcriptional co-regulator | 0.02 | Archaeplastida | |
| Pp3c25_7810V3.1 | No alias | SEUSS transcriptional co-regulator | 0.02 | Archaeplastida | |
| Solyc06g059750.3.1 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | Archaeplastida | |
| Solyc06g059760.3.1 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | Archaeplastida | |
| Solyc11g005990.2.1 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Zm00001e011073_P001 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Zm00001e018384_P001 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | Archaeplastida | |
| Zm00001e021381_P001 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | Archaeplastida | |
| Zm00001e029868_P001 | No alias | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Zm00001e039584_P001 | No alias | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029005 | LIM-bd/SEUSS | 50 | 304 |
| No external refs found! |