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  5. GSVIVT01010030001

GSVIVT01010030001


Description : Protein trichome berefringence-like 7 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0004349 (LandPlants) Phylogenetic Tree(s): OG_05_0004349_tree ,
OG_06_0003735 (SeedPlants) Phylogenetic Tree(s): OG_06_0003735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010030001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251740 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00023p00032550 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 35 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.04 Archaeplastida
AT5G06700 TBR Plant protein of unknown function (DUF828) 0.06 Archaeplastida
Gb_09995 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_19983 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.02 Archaeplastida
Gb_23718 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 Archaeplastida
Gb_23719 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.04 Archaeplastida
LOC_Os03g18140.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os05g28630.1 No alias xylan O-acetyltransferase (XOAT) 0.06 Archaeplastida
LOC_Os07g49280.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os12g01380.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
MA_441100g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_467548g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc01g016380.4.1 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g079400.3.1 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc07g006920.3.1 No alias Protein trichome birefringence-like 5 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g078910.3.1 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006156_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e026898_P004 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e035942_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e038414_P003 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 163 435
IPR025846 PMR5_N_dom 110 162
No external refs found!