Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.86
Description : RNA processing.RNA decay.exosome complex.associated co-factors.RRP6L exoribonuclease
Gene families : OG0001601 (Archaeplastida) Phylogenetic Tree(s): OG0001601_tree ,
OG_05_0008225 (LandPlants) Phylogenetic Tree(s): OG_05_0008225_tree ,
OG_06_0009761 (SeedPlants) Phylogenetic Tree(s): OG_06_0009761_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00037p00179540 | |
Cluster | HCCA: Cluster_204 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G35910 | No alias | Polynucleotidyl transferase, ribonuclease H fold protein... | 0.02 | Archaeplastida | |
GSVIVT01030425001 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.02 | Archaeplastida | |
Gb_34925 | No alias | exoribonuclease (RRP6L) | 0.03 | Archaeplastida | |
LOC_Os07g32890.1 | No alias | exoribonuclease (RRP6L) | 0.03 | Archaeplastida | |
LOC_Os10g30100.1 | No alias | exoribonuclease (RRP6L) | 0.02 | Archaeplastida | |
Mp7g12880.1 | No alias | exoribonuclease (RRP6L) | 0.02 | Archaeplastida | |
Zm00001e004727_P001 | No alias | exoribonuclease (RRP6L) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
CC | GO:0005622 | intracellular | IEA | Interproscan |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEA | Interproscan |
MF | GO:0008408 | 3'-5' exonuclease activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
BP | GO:0000910 | cytokinesis | IEP | Neighborhood |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004221 | obsolete ubiquitin thiolesterase activity | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
BP | GO:0007154 | cell communication | IEP | Neighborhood |
MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
No external refs found! |