GSVIVT01010251001

Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana

Gene families : OG0001715 (Archaeplastida) Phylogenetic Tree(s): OG0001715_tree ,
OG_05_0007552 (LandPlants) Phylogenetic Tree(s): OG_05_0007552_tree ,
OG_06_0006242 (SeedPlants) Phylogenetic Tree(s): OG_06_0006242_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01010251001
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000113.69	No alias	No description available	0.01	Archaeplastida
Cpa\|evm.model.tig00000889.16	No alias	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cpa\|evm.model.tig00020629.60	No alias	No description available	0.01	Archaeplastida
GSVIVT01032337001	No alias	No description available	0.05	Archaeplastida
Gb_27269	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g013600.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e007061_P002	No alias	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR034739	UvrD/AddA_N	1037	1355

External Links

No external refs found!