- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.TNO1 tethering factor
Gene families : OG0002800 (Archaeplastida) Phylogenetic Tree(s): OG0002800_tree ,
OG_05_0001972 (LandPlants) Phylogenetic Tree(s): OG_05_0001972_tree ,
OG_06_0001718 (SeedPlants) Phylogenetic Tree(s): OG_06_0001718_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01010295001 | |
| Cluster | HCCA: Cluster_222 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00254550 | evm_27.TU.AmTr_v1... | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
| AMTR_s00049p00185400 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.04 | Archaeplastida | |
| AT1G24460 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.09 | Archaeplastida | |
| AT4G31570 | No alias | CONTAINS InterPro DOMAIN/s: Prefoldin... | 0.13 | Archaeplastida | |
| Gb_40009 | No alias | TNO1 vesicle trafficking tethering factor | 0.08 | Archaeplastida | |
| LOC_Os02g38480.1 | No alias | TNO1 vesicle trafficking tethering factor | 0.02 | Archaeplastida | |
| MA_10431592g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_156987g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_167448g0020 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_4333439g0010 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Mp4g21920.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Pp3c4_12010V3.1 | No alias | No annotation | 0.05 | Archaeplastida | |
| Solyc05g014200.3.1 | No alias | TNO1 vesicle trafficking tethering factor | 0.07 | Archaeplastida | |
| Solyc08g006420.3.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Zm00001e015026_P001 | No alias | TNO1 vesicle trafficking tethering factor | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003689 | DNA clamp loader activity | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0003909 | DNA ligase activity | IEP | Neighborhood |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Neighborhood |
| MF | GO:0003980 | UDP-glucose:glycoprotein glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0004560 | alpha-L-fucosidase activity | IEP | Neighborhood |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005663 | DNA replication factor C complex | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006013 | mannose metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Neighborhood |
| BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
| BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| MF | GO:0015925 | galactosidase activity | IEP | Neighborhood |
| MF | GO:0015928 | fucosidase activity | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| MF | GO:0033170 | protein-DNA loading ATPase activity | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |