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  5. GSVIVT01010924001

GSVIVT01010924001


Description : Photosystem II D2 protein OS=Vitis vinifera


Gene families : OG0004828 (Archaeplastida) Phylogenetic Tree(s): OG0004828_tree ,
OG_05_0003703 (LandPlants) Phylogenetic Tree(s): OG_05_0003703_tree ,
OG_06_0002946 (SeedPlants) Phylogenetic Tree(s): OG_06_0002946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010924001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00106890 evm_27.TU.AmTr_v1... Photosystem II D2 protein OS=Amborella trichopoda 0.04 Archaeplastida
ATCG00270 PSBD photosystem II reaction center protein D 0.07 Archaeplastida
GSVIVT01029661001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.02 Archaeplastida
Gb_41667 No alias component PsbD/D2 of PS-II reaction center complex.... 0.06 Archaeplastida
LOC_Os02g24634.1 No alias component PsbD/D2 of PS-II reaction center complex 0.05 Archaeplastida
LOC_Os04g16872.1 No alias component PsbD/D2 of PS-II reaction center complex 0.1 Archaeplastida
Smo137879 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.09 Archaeplastida
Solyc00g230080.1.1 No alias Photosystem II D2 protein OS=Tupiella akineta... 0.09 Archaeplastida
Zm00001e015953_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.1 Archaeplastida
Zm00001e042043_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042109_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042158_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042173_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042427_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 18 78
No external refs found!