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  5. GSVIVT01011007001

GSVIVT01011007001


Description : Protein degradation.peptidase families.serine-type peptidase activities.Deg protease


Gene families : OG0000768 (Archaeplastida) Phylogenetic Tree(s): OG0000768_tree ,
OG_05_0009445 (LandPlants) Phylogenetic Tree(s): OG_05_0009445_tree ,
OG_06_0009991 (SeedPlants) Phylogenetic Tree(s): OG_06_0009991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011007001
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00143260 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
AT2G47940 DEGP2 DEGP protease 2 0.05 Archaeplastida
Gb_10855 No alias protease (Deg) 0.03 Archaeplastida
LOC_Os05g05480.1 No alias protease (Deg) 0.02 Archaeplastida
Mp3g23130.1 No alias protease (Deg) 0.05 Archaeplastida
Pp3c8_7470V3.1 No alias DegP protease 9 0.04 Archaeplastida
Solyc06g084480.3.1 No alias protease (Deg) 0.07 Archaeplastida
Solyc09g074420.4.1 No alias protease (Deg) 0.08 Archaeplastida
Zm00001e040416_P002 No alias protease (Deg) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001478 PDZ 321 420
No external refs found!