Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0090566 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01011008001 | |
Cluster | HCCA: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00211p00025860 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.06 | Archaeplastida | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.04 | Archaeplastida | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.03 | Archaeplastida | |
GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.05 | Archaeplastida | |
Gb_12414 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Gb_17830 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Gb_32864 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os01g48060.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os04g43910.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os04g57610.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Pp3c14_16990V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c6_26890V3.1 | No alias | auxin response factor 16 | 0.05 | Archaeplastida | |
Solyc03g031970.4.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc07g016180.3.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc07g042260.4.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc08g082630.3.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e013061_P001 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e016366_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e030290_P005 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |