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  5. GSVIVT01011044001

GSVIVT01011044001


Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0002452 (Archaeplastida) Phylogenetic Tree(s): OG0002452_tree ,
OG_05_0001770 (LandPlants) Phylogenetic Tree(s): OG_05_0001770_tree ,
OG_06_0001756 (SeedPlants) Phylogenetic Tree(s): OG_06_0001756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011044001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.05 Archaeplastida
AT1G54710 ATG18H, ATATG18H homolog of yeast autophagy 18 (ATG18) H 0.03 Archaeplastida
AT5G54730 ATATG18F, G18F, ATG18F homolog of yeast autophagy 18 (ATG18) F 0.03 Archaeplastida
Gb_13732 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
Gb_30474 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
LOC_Os01g57720.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
LOC_Os05g33610.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
Mp3g05770.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Pp3c20_18810V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.02 Archaeplastida
Smo442028 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
Solyc01g098430.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Solyc07g064060.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e031636_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022175 BCAS3 510 741
IPR001680 WD40_repeat 367 392
No external refs found!