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  5. GSVIVT01011098001

GSVIVT01011098001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.EDL component


Gene families : OG0003185 (Archaeplastida) Phylogenetic Tree(s): OG0003185_tree ,
OG_05_0002156 (LandPlants) Phylogenetic Tree(s): OG_05_0002156_tree ,
OG_06_0001612 (SeedPlants) Phylogenetic Tree(s): OG_06_0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011098001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT3G63060 EDL3 EID1-like 3 0.06 Archaeplastida
LOC_Os01g58850.1 No alias component EDL of SCF E3 ubiquitin ligase complex 0.07 Archaeplastida
LOC_Os05g41490.1 No alias component EDL of SCF E3 ubiquitin ligase complex 0.07 Archaeplastida
Solyc06g084320.1.1 No alias component EDL of SCF E3 ubiquitin ligase complex 0.05 Archaeplastida
Zm00001e027333_P001 No alias component EDL of SCF E3 ubiquitin ligase complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!