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  5. GSVIVT01011417001

GSVIVT01011417001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000815 (SeedPlants) Phylogenetic Tree(s): OG_06_0000815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011417001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.03 Archaeplastida
AT2G16720 MYB7, ATY49, ATMYB7 myb domain protein 7 0.03 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.03 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.04 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.04 Archaeplastida
AT3G28470 ATMYB35, TDF1 Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT4G37780 ATMYB87, MYB87 myb domain protein 87 0.01 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01033418001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_39081 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40629 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g18240.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g42850.2 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g46560.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_230300g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c5_2150V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g112390.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g052300.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g054980.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g079270.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g005890.3.1 No alias Transcription factor MYB101 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004114_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e012497_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026464_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041553_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!