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  5. GSVIVT01011436001

GSVIVT01011436001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000572 (SeedPlants) Phylogenetic Tree(s): OG_06_0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011436001
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G08810 MYB60, AtMYB60 myb domain protein 60 0.05 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT5G65230 AtMYB53, MYB53 myb domain protein 53 0.02 Archaeplastida
Cpa|evm.model.tig00000448.26 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Cpa|evm.model.tig00020780.48 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Cre17.g714229 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g62410.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g17190.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g45060.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g35390.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp2g22560.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c13_8880V3.1 No alias myb domain protein 4r1 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c2_250V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g073640.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc11g072060.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009262_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!