- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin
Gene families : OG0002234 (Archaeplastida) Phylogenetic Tree(s): OG0002234_tree ,
OG_05_0001971 (LandPlants) Phylogenetic Tree(s): OG_05_0001971_tree ,
OG_06_0006643 (SeedPlants) Phylogenetic Tree(s): OG_06_0006643_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01011662001 | |
| Cluster | HCCA: Cluster_236 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G14850 | NUP155 | nucleoporin 155 | 0.07 | Archaeplastida | |
| Cre09.g394350 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.06 | Archaeplastida | |
| Gb_24664 | No alias | NUP155 scaffold nucleoporin of nuclear pore complex | 0.06 | Archaeplastida | |
| LOC_Os06g20090.1 | No alias | NUP155 scaffold nucleoporin of nuclear pore complex | 0.08 | Archaeplastida | |
| Pp3c8_3720V3.1 | No alias | nucleoporin 155 | 0.06 | Archaeplastida | |
| Solyc07g008160.3.1 | No alias | NUP155 scaffold nucleoporin of nuclear pore complex | 0.07 | Archaeplastida | |
| Zm00001e000883_P002 | No alias | NUP155 scaffold nucleoporin of nuclear pore complex | 0.06 | Archaeplastida | |
| Zm00001e038690_P002 | No alias | NUP155 scaffold nucleoporin of nuclear pore complex | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
| MF | GO:0004004 | ATP-dependent RNA helicase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008186 | RNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |