AT1G48060

Description : F-box and associated interaction domains-containing protein

Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48060
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AT1G46912	No alias	F-box associated ubiquitination effector family protein	0.01	Archaeplastida
AT1G47350	No alias	F-box associated ubiquitination effector family protein	0.01	Archaeplastida
AT1G47730	No alias	F-box and associated interaction domains-containing protein	0.01	Archaeplastida
AT1G55947	No alias	No description available	0.07	Archaeplastida
AT2G13630	No alias	F-box associated ubiquitination effector family protein	0.01	Archaeplastida
AT2G40925	No alias	F-box and associated interaction domains-containing protein	0.02	Archaeplastida
AT3G49450	No alias	F-box and associated interaction domains-containing protein	0.01	Archaeplastida
AT3G57590	No alias	F-box and associated interaction domains-containing protein	0.01	Archaeplastida
AT4G09190	No alias	F-box and associated interaction domains-containing protein	0.02	Archaeplastida
AT4G38870	No alias	F-box and associated interaction domains-containing protein	0.02	Archaeplastida
AT5G18160	No alias	F-box and associated interaction domains-containing protein	0.03	Archaeplastida
AT5G52610	No alias	F-box and associated interaction domains-containing protein	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013187	F-box-assoc_dom_typ3	232	301
IPR001810	F-box_dom	12	50

External Links

No external refs found!