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  5. GSVIVT01011738001

GSVIVT01011738001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.WOX transcription factor


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0017018 (SeedPlants) Phylogenetic Tree(s): OG_06_0017018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011738001
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00149750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.02 Archaeplastida
AT5G46010 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.07 Archaeplastida
GSVIVT01018787001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01021144001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_921642g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc02g083950.3.1 No alias transcription factor (WOX) 0.09 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 85 144
No external refs found!