AMTR_s00038p00072170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.31

Description : Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000711 (Archaeplastida) Phylogenetic Tree(s): OG0000711_tree ,
OG_05_0002126 (LandPlants) Phylogenetic Tree(s): OG_05_0002126_tree ,
OG_06_0002129 (SeedPlants) Phylogenetic Tree(s): OG_06_0002129_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00072170
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.09 Archaeplastida
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.11 Archaeplastida
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 Archaeplastida
Cpa|evm.model.tig00000849.28 No alias No description available 0.03 Archaeplastida
Cpa|evm.model.tig00000900.28 No alias No description available 0.05 Archaeplastida
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 Archaeplastida
GSVIVT01027447001 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.11 Archaeplastida
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
LOC_Os01g55570.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g49870.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 Archaeplastida
LOC_Os02g52260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g15400.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 Archaeplastida
LOC_Os07g28610.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.04 Archaeplastida
LOC_Os10g39150.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.06 Archaeplastida
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
MA_734271g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_904218g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.05 Archaeplastida
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.07 Archaeplastida
Pp3c17_14681V3.1 No alias No annotation 0.03 Archaeplastida
Solyc01g095430.3.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Solyc06g066620.4.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.04 Archaeplastida
Solyc10g005050.3.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.11 Archaeplastida
Solyc10g011770.4.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Solyc11g010480.2.1 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.08 Archaeplastida
Zm00001e000193_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Zm00001e002212_P002 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.07 Archaeplastida
Zm00001e015912_P002 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.02 Archaeplastida
Zm00001e023473_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Zm00001e023828_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e029009_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030948_P002 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Zm00001e034870_P002 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005960 glycine cleavage complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025564 CAAD_dom 74 158
No external refs found!