GSVIVT01011789001

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase

Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0000506 (LandPlants) Phylogenetic Tree(s): OG_05_0000506_tree ,
OG_06_0008056 (SeedPlants) Phylogenetic Tree(s): OG_06_0008056_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01011789001

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01028110001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
Gb_37740	No alias	RING-v-class E3 ligase	0.04	Archaeplastida
LOC_Os01g66970.1	No alias	RING-v-class E3 ligase	0.03	Archaeplastida
LOC_Os05g28730.1	No alias	RING-v-class E3 ligase	0.03	Archaeplastida
Solyc01g079530.4.1	No alias	RING-v-class E3 ligase	0.03	Archaeplastida
Solyc03g116030.4.1	No alias	RING-v-class E3 ligase	0.02	Archaeplastida
Solyc06g069780.4.1	No alias	RING-v-class E3 ligase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	123	239
IPR011016	Znf_RING-CH	72	117

External Links

No external refs found!

GSVIVT01011789001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation