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  5. AMTR_s00038p00085900

AMTR_s00038p00085900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.41

Description : Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase


Gene families : OG0000071 (Archaeplastida) Phylogenetic Tree(s): OG0000071_tree ,
OG_05_0000194 (LandPlants) Phylogenetic Tree(s): OG_05_0000194_tree ,
OG_06_0000329 (SeedPlants) Phylogenetic Tree(s): OG_06_0000329_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00085900
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00113850 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AT1G11080 scpl31 serine carboxypeptidase-like 31 0.02 Archaeplastida
AT2G05850 scpl38 serine carboxypeptidase-like 38 0.03 Archaeplastida
AT2G35770 scpl28 serine carboxypeptidase-like 28 0.04 Archaeplastida
AT3G52000 scpl36 serine carboxypeptidase-like 36 0.03 Archaeplastida
AT5G42230 scpl41 serine carboxypeptidase-like 41 0.03 Archaeplastida
GSVIVT01011355001 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01029749001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01031781001 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
Gb_29794 No alias serine carboxypeptidase 0.03 Archaeplastida
Gb_31896 No alias serine carboxypeptidase 0.03 Archaeplastida
LOC_Os03g09190.1 No alias serine carboxypeptidase 0.03 Archaeplastida
LOC_Os07g46350.1 No alias serine carboxypeptidase 0.03 Archaeplastida
LOC_Os11g10750.1 No alias serine carboxypeptidase 0.04 Archaeplastida
MA_180788g0010 No alias serine carboxypeptidase 0.03 Archaeplastida
Mp7g07030.1 No alias serine carboxypeptidase 0.03 Archaeplastida
Pp3c10_8530V3.1 No alias alpha/beta-Hydrolases superfamily protein 0.02 Archaeplastida
Pp3c17_7990V3.1 No alias alpha/beta-Hydrolases superfamily protein 0.03 Archaeplastida
Solyc01g087950.3.1 No alias serine carboxypeptidase 0.03 Archaeplastida
Solyc01g104850.3.1 No alias serine carboxypeptidase 0.04 Archaeplastida
Solyc01g108470.3.1 No alias serine carboxypeptidase 0.03 Archaeplastida
Solyc02g078690.2.1 No alias serine carboxypeptidase 0.03 Archaeplastida
Zm00001e001857_P002 No alias serine carboxypeptidase 0.03 Archaeplastida
Zm00001e034382_P001 No alias serine carboxypeptidase 0.03 Archaeplastida
Zm00001e035744_P002 No alias serine carboxypeptidase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004185 serine-type carboxypeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001563 Peptidase_S10 84 488
No external refs found!