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  5. GSVIVT01011896001

GSVIVT01011896001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011896001
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00051070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AT1G68510 LBD42 LOB domain-containing protein 42 0.03 Archaeplastida
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g03890.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g32770.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os03g33090.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_70989g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_75731g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_80122g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Pp3c18_9980V3.1 No alias LOB domain-containing protein 37 0.04 Archaeplastida
Solyc04g077990.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc05g009320.4.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e005129_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e017028_P001 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0018580 nitronate monooxygenase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 4 97
No external refs found!