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  5. GSVIVT01011907001

GSVIVT01011907001


Description : Ubiquitin receptor RAD23c OS=Arabidopsis thaliana


Gene families : OG0001284 (Archaeplastida) Phylogenetic Tree(s): OG0001284_tree ,
OG_05_0001166 (LandPlants) Phylogenetic Tree(s): OG_05_0001166_tree ,
OG_06_0001263 (SeedPlants) Phylogenetic Tree(s): OG_06_0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011907001
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_16820V3.1 No alias Rad23 UV excision repair protein family 0.04 Archaeplastida
Smo77427 No alias Ubiquitin receptor RAD23b OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g085840.2.1 No alias shuttle protein (RAD23) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015360 XPC-bd 272 327
IPR015940 UBA 353 388
IPR015940 UBA 170 207
IPR000626 Ubiquitin_dom 3 76
No external refs found!