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  5. GSVIVT01012018001

GSVIVT01012018001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012018001
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00044p00221710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.07 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Cre01.g051700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01005189001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22087 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_33932 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g20910.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29676.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34620.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os10g30310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g02350.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g42530.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_101154g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10200587g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_227897g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_92848g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp4g15970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp8g15250.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c13_4710V3.1 No alias TOXICOS EN LEVADURA 2 0.01 Archaeplastida
Pp3c19_14050V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c24_7770V3.1 No alias hypoxia-responsive family protein / zinc finger... 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo59303 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc01g100100.4.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.01 Archaeplastida
Solyc05g008640.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.01 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g055140.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 94 137
No external refs found!