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  5. GSVIVT01012036001

GSVIVT01012036001


Description : Nutrient uptake.iron uptake.chelation-based strategy uptake.YSL-type Fe(III)-chelator transporter


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0112570 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0090662 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012036001
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00229620 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
AMTR_s00029p00090040 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.01 Archaeplastida
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.01 Archaeplastida
AMTR_s00154p00062710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.04 Archaeplastida
AMTR_s00154p00064240 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL6... 0.02 Archaeplastida
AMTR_s00154p00064710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.01 Archaeplastida
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.01 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
LOC_Os04g32060.2 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_133797g0010 No alias ferric cation-chelator transporter (YSL) 0.04 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.02 Archaeplastida
Solyc02g005340.4.1 No alias No annotation 0.01 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.12 Archaeplastida
Zm00001e015280_P004 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.08 Archaeplastida
Zm00001e025368_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e026899_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e026901_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e028817_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e031577_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.02 Archaeplastida
Zm00001e033936_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.02 Archaeplastida
Zm00001e041925_P002 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 59 381
IPR004813 OPT 395 462
No external refs found!