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No description available
Gene families : OG0002375 (Archaeplastida) Phylogenetic Tree(s): OG0002375_tree ,
OG_05_0005839 (LandPlants) Phylogenetic Tree(s): OG_05_0005839_tree ,
OG_06_0007554 (SeedPlants) Phylogenetic Tree(s): OG_06_0007554_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01012044001 | |
| Cluster | HCCA: Cluster_106 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00083380 | evm_27.TU.AmTr_v1... | No description available | 0.12 | Archaeplastida | |
| AT5G23110 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.2 | Archaeplastida | |
| Cpa|evm.model.tig00000615.1 | No alias | No description available | 0.01 | Archaeplastida | |
| Cpa|evm.model.tig00000615.2 | No alias | No description available | 0.02 | Archaeplastida | |
| Gb_03748 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| MA_10436421g0010 | No alias | no hits & (original description: none) | 0.16 | Archaeplastida | |
| MA_29192g0010 | No alias | no hits & (original description: none) | 0.16 | Archaeplastida | |
| Mp5g01480.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Pp3c9_15860V3.1 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Archaeplastida | |
| Solyc02g014180.2.1 | No alias | no hits & (original description: none) | 0.17 | Archaeplastida | |
| Solyc02g014190.4.1 | No alias | no hits & (original description: none) | 0.15 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0003909 | DNA ligase activity | IEP | Neighborhood |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Neighborhood |
| MF | GO:0004057 | arginyltransferase activity | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006013 | mannose metabolic process | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| BP | GO:0016598 | protein arginylation | IEP | Neighborhood |
| MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Neighborhood |
| BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |