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  5. GSVIVT01012049001

GSVIVT01012049001


Description : RNA biosynthesis.transcriptional activation.HUA2 transcription factor


Gene families : OG0001669 (Archaeplastida) Phylogenetic Tree(s): OG0001669_tree ,
OG_05_0001314 (LandPlants) Phylogenetic Tree(s): OG_05_0001314_tree ,
OG_06_0004134 (SeedPlants) Phylogenetic Tree(s): OG_06_0004134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012049001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HUA2... 0.08 Archaeplastida
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.14 Archaeplastida
AT5G08230 No alias Tudor/PWWP/MBT domain-containing protein 0.03 Archaeplastida
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.09 Archaeplastida
Gb_39860 No alias transcription factor (HUA2) 0.07 Archaeplastida
LOC_Os03g24339.1 No alias transcription factor (HUA2) 0.11 Archaeplastida
LOC_Os07g46180.1 No alias transcription factor (HUA2) 0.06 Archaeplastida
LOC_Os08g01054.2 No alias transcription factor (HUA2) 0.1 Archaeplastida
MA_3338g0010 No alias transcription factor (HUA2) 0.07 Archaeplastida
MA_9328225g0010 No alias Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9359526g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp8g15320.1 No alias transcription factor (HUA2) 0.11 Archaeplastida
Pp3c11_11950V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.11 Archaeplastida
Pp3c7_13020V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.12 Archaeplastida
Pp3c7_13060V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.15 Archaeplastida
Smo404055 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.05 Archaeplastida
Smo414202 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.05 Archaeplastida
Solyc02g014115.1.1 No alias transcription factor (HUA2) 0.1 Archaeplastida
Solyc02g014130.3.1 No alias ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.15 Archaeplastida
Solyc09g064840.4.1 No alias transcription factor (HUA2) 0.18 Archaeplastida
Zm00001e001720_P002 No alias transcription factor (HUA2) 0.15 Archaeplastida
Zm00001e024276_P001 No alias transcription factor (HUA2) 0.07 Archaeplastida
Zm00001e029104_P001 No alias transcription factor (HUA2) 0.13 Archaeplastida
Zm00001e038169_P004 No alias transcription factor (HUA2) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR006903 RNA_pol_II-bd 759 825
IPR000313 PWWP_dom 19 105
No external refs found!