GSVIVT01012080001

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27 component

Gene families : OG0002403 (Archaeplastida) Phylogenetic Tree(s): OG0002403_tree ,
OG_05_0112579 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0090671 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01012080001
Cluster	HCCA: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00176990	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	Archaeplastida
AMTR_s00045p00086530	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	Archaeplastida
AT3G22230	No alias	Ribosomal L27e protein family	0.13	Archaeplastida
AT4G15000	No alias	Ribosomal L27e protein family	0.15	Archaeplastida
Cpa\|evm.model.tig00021275.23	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	Archaeplastida
Cre17.g701650	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	Archaeplastida
Gb_34700	No alias	component RPL27 of LSU proteome component	0.03	Archaeplastida
Gb_36674	No alias	component RPL27 of LSU proteome component	0.11	Archaeplastida
LOC_Os02g18380.1	No alias	component RPL27 of LSU proteome component	0.11	Archaeplastida
LOC_Os10g41470.1	No alias	component RPL27 of LSU proteome component	0.1	Archaeplastida
MA_10034g0010	No alias	component RPL27 of LSU proteome component	0.03	Archaeplastida
MA_3390g0010	No alias	component RPL27 of LSU proteome component	0.07	Archaeplastida
Mp4g23910.1	No alias	component RPL27 of LSU proteome component	0.11	Archaeplastida
Pp3c15_4610V3.1	No alias	Ribosomal L27e protein family	0.17	Archaeplastida
Pp3c24_20290V3.1	No alias	Ribosomal L27e protein family	0.21	Archaeplastida
Pp3c8_24410V3.1	No alias	Ribosomal L27e protein family	0.24	Archaeplastida
Smo166700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	Archaeplastida
Solyc06g073300.1.1	No alias	component RPL27 of LSU proteome component	0.18	Archaeplastida
Solyc07g043360.1.1	No alias	component RPL27 of LSU proteome component	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0005743	mitochondrial inner membrane	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
CC	GO:0019866	organelle inner membrane	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
CC	GO:0035145	exon-exon junction complex	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0070469	respiratory chain	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001141	Ribosomal_L27e	27	102

External Links

No external refs found!

GSVIVT01012080001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation