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  5. GSVIVT01012100001

GSVIVT01012100001


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-type protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree ,
OG_05_0000618 (LandPlants) Phylogenetic Tree(s): OG_05_0000618_tree ,
OG_06_0000855 (SeedPlants) Phylogenetic Tree(s): OG_06_0000855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012100001
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g44430.2 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
MA_11045g0010 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
MA_94963g0010 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.04 Archaeplastida
Mp8g09990.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
Pp3c12_11090V3.1 No alias vesicle-associated membrane protein 726 0.04 Archaeplastida
Solyc02g069150.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
InterPro domains Description Start Stop
IPR010908 Longin_dom 34 111
IPR001388 Synaptobrevin 129 215
No external refs found!