1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01012138001

GSVIVT01012138001


Description : Cell wall.pectin.modification and degradation.polygalacturonase activities.QRT3 polygalacturonase


Gene families : OG0003590 (Archaeplastida) Phylogenetic Tree(s): OG0003590_tree ,
OG_05_0002501 (LandPlants) Phylogenetic Tree(s): OG_05_0002501_tree ,
OG_06_0001950 (SeedPlants) Phylogenetic Tree(s): OG_06_0001950_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012138001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g52320.1 No alias polygalacturonase (QRT3) 0.02 Archaeplastida
MA_10425986g0020 No alias polygalacturonase (QRT3) 0.02 Archaeplastida
MA_8818361g0010 No alias polygalacturonase (QRT3) 0.03 Archaeplastida
MA_917578g0010 No alias polygalacturonase (QRT3) 0.01 Archaeplastida
Solyc02g068410.3.1 No alias polygalacturonase (QRT3) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!