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  5. GSVIVT01012145001

GSVIVT01012145001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0005457 (Archaeplastida) Phylogenetic Tree(s): OG0005457_tree ,
OG_05_0005665 (LandPlants) Phylogenetic Tree(s): OG_05_0005665_tree ,
OG_06_0006811 (SeedPlants) Phylogenetic Tree(s): OG_06_0006811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012145001
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AT1G30970 SUF4 zinc finger (C2H2 type) family protein 0.04 Archaeplastida
Cre06.g305200 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os09g38790.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10435270g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc02g081620.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!