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  5. AT1G48100

AT1G48100


Description : Pectin lyase-like superfamily protein


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0002274 (SeedPlants) Phylogenetic Tree(s): OG_06_0002274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G48100
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00026540 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT1G05650 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
LOC_Os05g20020.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g21140.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000024 maltose biosynthetic process IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0004310 farnesyl-diphosphate farnesyltransferase activity IEP Neighborhood
MF GO:0004311 farnesyltranstransferase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010150 leaf senescence IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015865 purine nucleotide transport IEP Neighborhood
BP GO:0015867 ATP transport IEP Neighborhood
BP GO:0015868 purine ribonucleotide transport IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
BP GO:0016144 S-glycoside biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019758 glycosinolate biosynthetic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
BP GO:0019761 glucosinolate biosynthetic process IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031647 regulation of protein stability IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
MF GO:0035250 UDP-galactosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
BP GO:0050821 protein stabilization IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051503 adenine nucleotide transport IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
BP GO:0090693 plant organ senescence IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 114 427
No external refs found!