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  5. GSVIVT01012216001

GSVIVT01012216001


Description : Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana


Gene families : OG0009688 (Archaeplastida) Phylogenetic Tree(s): OG0009688_tree ,
OG_05_0009724 (LandPlants) Phylogenetic Tree(s): OG_05_0009724_tree ,
OG_06_0007223 (SeedPlants) Phylogenetic Tree(s): OG_06_0007223_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012216001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00125440 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT1G26500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 280 323
IPR002885 Pentatricopeptide_repeat 342 388
IPR002885 Pentatricopeptide_repeat 208 238
No external refs found!