GSVIVT01012247001

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor

Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01012247001
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
AMTR_s00106p00142470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.02	Archaeplastida
AMTR_s00106p00142740	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00106p00144050	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.03	Archaeplastida
AT1G53160	SPL4	squamosa promoter binding protein-like 4	0.04	Archaeplastida
AT3G57920	SPL15	squamosa promoter binding protein-like 15	0.07	Archaeplastida
GSVIVT01018204001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.03	Archaeplastida
Gb_02576	No alias	transcription factor (SBP)	0.03	Archaeplastida
Gb_15605	No alias	transcription factor (SBP)	0.03	Archaeplastida
MA_7789506g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e010067_P001	No alias	transcription factor (SBP)	0.06	Archaeplastida
Zm00001e010443_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e013795_P002	No alias	transcription factor (SBP)	0.04	Archaeplastida
Zm00001e025110_P001	No alias	transcription factor (SBP)	0.05	Archaeplastida
Zm00001e034537_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e041526_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	154	227

External Links

No external refs found!