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  5. AMTR_s00038p00129890

AMTR_s00038p00129890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.74

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00129890
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00058540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00015p00059040 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00026p00183780 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00026p00249050 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00035p00192640 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00070p00090890 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00073p00196070 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00083p00122040 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00121p00041090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00165p00071670 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!