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Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.79
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase
Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001181 (SeedPlants) Phylogenetic Tree(s): OG_06_0001181_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00038p00135070 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000158.69 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01037379001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| LOC_Os08g38060.1 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_19897g0010 | No alias | E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_433917g0010 | No alias | Probable E3 ubiquitin-protein ligase RHC1A... | 0.02 | Archaeplastida | |
| MA_44557g0010 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006739 | NADP metabolic process | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| BP | GO:0010035 | response to inorganic substance | IEP | Neighborhood |
| BP | GO:0010038 | response to metal ion | IEP | Neighborhood |
| CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
| MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity | IEP | Neighborhood |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019748 | secondary metabolic process | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0046937 | phytochelatin metabolic process | IEP | Neighborhood |
| BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Neighborhood |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 70 | 114 |
| No external refs found! |