GSVIVT01012490001


Description : Protein argonaute 7 OS=Arabidopsis thaliana


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0005582 (LandPlants) Phylogenetic Tree(s): OG_05_0005582_tree ,
OG_06_0003518 (SeedPlants) Phylogenetic Tree(s): OG_06_0003518_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012490001
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269950 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.08 Archaeplastida
AT1G31290 AGO3 ARGONAUTE 3 0.06 Archaeplastida
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.08 Archaeplastida
GSVIVT01015464001 No alias Chromatin organisation.DNA methylation.canonical... 0.06 Archaeplastida
GSVIVT01018054001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
GSVIVT01033726001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
LOC_Os02g40320.1 No alias Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g58600.1 No alias Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g47870.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida
LOC_Os06g51310.2 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.06 Archaeplastida
LOC_Os07g09020.1 No alias Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10241027g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_158278g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_246308g0010 No alias Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_594g0010 No alias Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_85246g0010 No alias Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp6g14610.1 No alias Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp6g20400.1 No alias siRNA-integrating factor (AGO) 0.03 Archaeplastida
Pp3c17_16550V3.1 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Archaeplastida
Pp3c19_20670V3.1 No alias Argonaute family protein 0.03 Archaeplastida
Smo98227 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Solyc01g010970.3.1 No alias Protein argonaute 7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc01g096750.1.1 No alias siRNA-integrating factor (AGO) 0.03 Archaeplastida
Solyc02g069270.2.1 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 Archaeplastida
Solyc09g082830.4.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.02 Archaeplastida
Zm00001e002044_P002 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR014811 ArgoL1 286 335
IPR003165 Piwi 793 847
IPR003165 Piwi 666 792
IPR032474 Argonaute_N 150 276
IPR003100 PAZ_dom 349 470
No external refs found!