1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01012605001

GSVIVT01012605001


Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0002109 (LandPlants) Phylogenetic Tree(s): OG_05_0002109_tree ,
OG_06_0001477 (SeedPlants) Phylogenetic Tree(s): OG_06_0001477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012605001

Target Alias Description ECC score Gene Family Method Actions
AT3G53065 No alias D-galactoside/L-rhamnose binding SUEL lectin protein 0.02 Archaeplastida
AT3G53075 No alias D-galactoside/L-rhamnose binding SUEL lectin protein 0.01 Archaeplastida
AT3G53080 No alias D-galactoside/L-rhamnose binding SUEL lectin protein 0.01 Archaeplastida
AT5G63800 BGAL6, MUM2 Glycosyl hydrolase family 35 protein 0.02 Archaeplastida
GSVIVT01008834001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.08 Archaeplastida
LOC_Os01g34920.1 No alias beta-galactosidase (BGAL) 0.01 Archaeplastida
MA_10071760g0010 No alias Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_207340g0010 No alias Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc07g042220.2.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e019757_P001 No alias beta-galactosidase (BGAL) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 1 108
No external refs found!