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  5. GSVIVT01012620001

GSVIVT01012620001


Description : Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0014095 (Archaeplastida) Phylogenetic Tree(s): OG0014095_tree ,
OG_05_0015691 (LandPlants) Phylogenetic Tree(s): OG_05_0015691_tree ,
OG_06_0014091 (SeedPlants) Phylogenetic Tree(s): OG_06_0014091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012620001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G09220 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Archaeplastida
GSVIVT01015793001 No alias No description available 0.07 Archaeplastida
Solyc06g009620.1.1 No alias Pentatricopeptide repeat-containing protein At1g09220,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 291 338
IPR002885 Pentatricopeptide_repeat 359 385
IPR002885 Pentatricopeptide_repeat 128 154
IPR002885 Pentatricopeptide_repeat 188 213
IPR002885 Pentatricopeptide_repeat 263 289
IPR002885 Pentatricopeptide_repeat 157 183
No external refs found!