Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01012639001 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT2G45220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | Archaeplastida | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G51500 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.06 | Archaeplastida | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
GSVIVT01027359001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01027653001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
Gb_01424 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_03174 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_10522 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_15174 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Gb_24214 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g20980.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g57854.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os04g35770.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os05g29790.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os08g12410.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_10332149g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_10433178g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10435891g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10436266g0010 | No alias | Pectinesterase 3 OS=Citrus sinensis... | 0.05 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.03 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_931259g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c15_12280V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Pp3c18_22120V3.1 | No alias | pectin methylesterase PCR fragment F | 0.01 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.01 | Archaeplastida | |
Smo266995 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc01g099950.1.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g064190.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e011069_P001 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Zm00001e025576_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e036264_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
No external refs found! |