AMTR_s00038p00163720 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.101

Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor

Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00038p00163720
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AT1G26380	No alias	FAD-binding Berberine family protein	0.05	Archaeplastida
AT1G26390	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT1G26410	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT1G26420	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT1G30720	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT4G20860	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT5G44380	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
AT5G44390	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
GSVIVT01020745001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
GSVIVT01021720001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
GSVIVT01021723001	No alias	Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana	0.06	Archaeplastida
GSVIVT01021734001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Gb_21185	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Gb_21186	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os06g35560.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
LOC_Os06g35630.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
LOC_Os06g35700.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
MA_162773g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
MA_186285g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
MA_260168g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
MA_5468901g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc02g022860.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Solyc02g070090.1.1	No alias	Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc02g070110.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc02g070180.3.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Solyc06g065060.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Solyc06g065070.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e021429_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e035614_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e037256_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.06	Archaeplastida
Zm00001e040211_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e042367_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e042369_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	3	87

External Links

No external refs found!

AMTR_s00038p00163720 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation