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  5. GSVIVT01012846001

GSVIVT01012846001


Description : Protein SRG1 OS=Arabidopsis thaliana


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0001434 (LandPlants) Phylogenetic Tree(s): OG_05_0001434_tree ,
OG_06_0000751 (SeedPlants) Phylogenetic Tree(s): OG_06_0000751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012846001
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00217060 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.03 Archaeplastida
AT3G21420 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
MA_9844312g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.03 Archaeplastida
Mp3g11110.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.02 Archaeplastida
Pp3c18_7580V3.1 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
Smo90714 No alias Protein SRG1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g108860.3.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.03 Archaeplastida
Solyc01g108880.4.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g071360.4.1 No alias No annotation 0.03 Archaeplastida
Solyc02g071480.3.1 No alias Codeine O-demethylase OS=Papaver somniferum... 0.04 Archaeplastida
Zm00001e018713_P002 No alias oxidoreductase (LBO) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 212 309
IPR026992 DIOX_N 50 163
No external refs found!