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  5. GSVIVT01012909001

GSVIVT01012909001


Description : UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001544 (Archaeplastida) Phylogenetic Tree(s): OG0001544_tree ,
OG_05_0001145 (LandPlants) Phylogenetic Tree(s): OG_05_0001145_tree ,
OG_06_0003981 (SeedPlants) Phylogenetic Tree(s): OG_06_0003981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012909001
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00021530 evm_27.TU.AmTr_v1... UV-B-induced protein At3g17800, chloroplastic... 0.03 Archaeplastida
AT3G17800 No alias Protein of unknown function (DUF760) 0.04 Archaeplastida
LOC_Os03g50870.1 No alias UV-B-induced protein At3g17800, chloroplastic... 0.07 Archaeplastida
LOC_Os04g50860.1 No alias UV-B-induced protein At3g17800, chloroplastic... 0.05 Archaeplastida
Solyc03g098000.3.1 No alias UV-B-induced protein At3g17800, chloroplastic... 0.05 Archaeplastida
Zm00001e041557_P002 No alias UV-B-induced protein At3g17800, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR008479 DUF760 139 265
No external refs found!