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  5. GSVIVT01012938001

GSVIVT01012938001


Description : Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012938001

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01005260001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.01 Archaeplastida
GSVIVT01017823001 No alias Pentatricopeptide repeat-containing protein At2g36980,... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 301 348
IPR002885 Pentatricopeptide_repeat 142 167
IPR002885 Pentatricopeptide_repeat 171 198
IPR002885 Pentatricopeptide_repeat 201 230
IPR002885 Pentatricopeptide_repeat 376 399
No external refs found!