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  5. GSVIVT01013073001

GSVIVT01013073001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP IV transcription factor


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0011473 (SeedPlants) Phylogenetic Tree(s): OG_06_0011473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013073001
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00089530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT4G17710 HDG4 homeodomain GLABROUS 4 0.05 Archaeplastida
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
LOC_Os08g04190.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Mp7g09710.1 No alias transcription factor (HD-ZIP IV) 0.07 Archaeplastida
Pp3c17_16910V3.1 No alias protodermal factor 2 0.03 Archaeplastida
Solyc02g080260.4.1 No alias transcription factor (HD-ZIP IV) 0.12 Archaeplastida
Zm00001e002453_P001 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e040312_P001 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 87 142
IPR002913 START_lipid-bd_dom 285 509
No external refs found!