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  5. GSVIVT01013145001

GSVIVT01013145001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0001298 (SeedPlants) Phylogenetic Tree(s): OG_06_0001298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013145001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00126990 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT3G11110 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G10160 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G30400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cre01.g009101 No alias No description available 0.05 Archaeplastida
Gb_39486 No alias RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_229590g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_38690g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc07g006360.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e034469_P001 No alias ubiquitin protein ligase (XERICO) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 105 148
No external refs found!