GSVIVT01013147001


Description : Protein TORNADO 2 OS=Arabidopsis thaliana


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013147001
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.03 Archaeplastida
AT3G45600 TET3 tetraspanin3 0.03 Archaeplastida
Gb_26509 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_100296g0010 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_391725g0010 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g075360.3.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g076850.3.1 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029484_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 6 251
No external refs found!