GSVIVT01013149001


Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000533 (LandPlants) Phylogenetic Tree(s): OG_05_0000533_tree ,
OG_06_0001021 (SeedPlants) Phylogenetic Tree(s): OG_06_0001021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013149001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
AMTR_s00032p00241350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
AT1G21000 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
AT1G32700 No alias PLATZ transcription factor family protein 0.07 Archaeplastida
AT1G43000 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
AT1G76590 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
AT4G17900 No alias PLATZ transcription factor family protein 0.07 Archaeplastida
LOC_Os01g33350.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os02g07650.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os02g46610.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os04g50120.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.05 Archaeplastida
LOC_Os10g42410.3 No alias transcription factor (PLATZ) 0.04 Archaeplastida
MA_14309g0010 No alias transcription factor (PLATZ) 0.03 Archaeplastida
MA_14971g0010 No alias transcription factor (PLATZ) 0.02 Archaeplastida
MA_8256450g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c13_4760V3.1 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
Solyc06g061240.4.1 No alias transcription factor (PLATZ) 0.12 Archaeplastida
Solyc08g005100.3.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Solyc08g076860.3.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Solyc12g010470.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007100_P003 No alias transcription factor (PLATZ) 0.06 Archaeplastida
Zm00001e013748_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 114 185
No external refs found!