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  5. GSVIVT01013156001

GSVIVT01013156001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0001395 (SeedPlants) Phylogenetic Tree(s): OG_06_0001395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013156001
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.04 Archaeplastida
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.03 Archaeplastida
Gb_04728 No alias no description available(sp|a0a3q7hrz6|myc2_sollc : 189.0) 0.06 Archaeplastida
Gb_10001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_36294 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_10435905g0020 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_4076g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_5838g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g083980.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc08g005050.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc08g076930.1.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e002421_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e020021_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e037785_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 40 113
No external refs found!