GSVIVT01013310001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01013310001
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000840001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.04	Archaeplastida
GSVIVT01000871001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
GSVIVT01003817001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	Archaeplastida
GSVIVT01004013001	No alias	Putative disease resistance protein At3g14460...	0.04	Archaeplastida
GSVIVT01011193001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	Archaeplastida
GSVIVT01019351001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.02	Archaeplastida
GSVIVT01022962001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.06	Archaeplastida
GSVIVT01022963001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
GSVIVT01027229001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	Archaeplastida
GSVIVT01027270001	No alias	Putative disease resistance protein At3g14460...	0.03	Archaeplastida
GSVIVT01032183001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	Archaeplastida
GSVIVT01032189001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
GSVIVT01032204001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.03	Archaeplastida
GSVIVT01038298001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	Archaeplastida
LOC_Os11g29110.1	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.05	Archaeplastida
Solyc09g005290.1.1	No alias	Putative disease resistance protein RGA1 OS=Solanum...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	107	325

External Links

No external refs found!

GSVIVT01013310001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation