GSVIVT01013328001

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase

Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0001017 (SeedPlants) Phylogenetic Tree(s): OG_06_0001017_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01013328001
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
MA_102783g0010	No alias	bifunctional alpha-L-arabinofuranosidase and...	0.03	Archaeplastida
MA_39151g0010	No alias	bifunctional alpha-L-arabinofuranosidase and...	0.05	Archaeplastida
MA_4577g0010	No alias	bifunctional alpha-L-arabinofuranosidase and...	0.05	Archaeplastida
Solyc11g044910.2.1	No alias	bifunctional alpha-L-arabinofuranosidase and...	0.04	Archaeplastida
Zm00001e024309_P001	No alias	bifunctional alpha-L-arabinofuranosidase and...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR026891	Fn3-like	676	742
IPR001764	Glyco_hydro_3_N	121	363
IPR002772	Glyco_hydro_3_C	409	638

External Links

No external refs found!

GSVIVT01013328001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation